PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016435385.1
Common NameZFT1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family C2H2
Protein Properties Length: 253aa    MW: 27033.1 Da    PI: 7.8259
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016435385.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H210.90.001493115123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ykC+ Cgk F +   L  H  +H
  XP_016435385.1  93 YKCSVCGKGFGSYQALGGHKASH 115
                     9*********9999998888777 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF139123.0E-1392117IPR007087Zinc finger, C2H2
SuperFamilySSF576672.48E-992115No hitNo description
Gene3DG3DSA:3.30.160.609.5E-493115IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
SMARTSM003550.01993115IPR015880Zinc finger, C2H2-like
PROSITE profilePS5015710.32593115IPR007087Zinc finger, C2H2
PROSITE patternPS00028095115IPR007087Zinc finger, C2H2
SuperFamilySSF576672.48E-9150177No hitNo description
PfamPF139123.0E-11154179IPR007087Zinc finger, C2H2
SMARTSM003551.8155177IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.058155177IPR007087Zinc finger, C2H2
PROSITE patternPS000280157177IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    Send to blast
MALETLNSPT TTTPPTFQFE NNGQLRYLEN WTKGKRSKRP RSMERQPTEE EYLALCLIML  60
ARSDGSANQE QSLTPPPAPV MKIHAPPEEK MVYKCSVCGK GFGSYQALGG HKASHRKLVA  120
GGGGGDDQST TSTTTNATGT TSSANGNGNG SGKTHECSIC HKCFPTGQAL GGHKRCHYDG  180
GNSNASVSVS ASVGVTSSEG VGSTVSHRDF DLNIPALPEF WPRFGFGEDE VESPHPAKKS  240
RLSLPPKFEL FGE
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAB1868990.0AB186899.1 Nicotiana tabacum ZFT1 mRNA for Cys2-His2 type zinc finger protein, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009771319.10.0PREDICTED: zinc finger protein ZAT10-like
RefseqXP_016435385.10.0PREDICTED: zinc finger protein ZAT10-like
SwissprotQ962898e-68ZAT10_ARATH; Zinc finger protein ZAT10
TrEMBLQ4AEC30.0Q4AEC3_TOBAC; Cys2-His2 type zinc finger protein
STRINGSolyc04g077980.1.11e-125(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA7352495
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27730.12e-51salt tolerance zinc finger
Publications ? help Back to Top
  1. Uehara Y, et al.
    Tobacco ZFT1, a transcriptional repressor with a Cys2/His2 type zinc finger motif that functions in spermine-signaling pathway.
    Plant Mol. Biol., 2005. 59(3): p. 435-48
    [PMID:16235109]